transmart_loader.collection_validator module

class transmart_loader.collection_validator.CollectionValidator

Bases: transmart_loader.collection_visitor.CollectionVisitor

Validation class for TranSMART data collections.

static validate(collection: transmart_loader.transmart.DataCollection)

visit_concept(concept: transmart_loader.transmart.Concept) → None

visit_node(node: transmart_loader.transmart.TreeNode) → None

visit_observation(observation: transmart_loader.transmart.Observation) → None

visit_patient(patient: transmart_loader.transmart.Patient) → None

visit_study(study: transmart_loader.transmart.Study) → None

visit_trial_visit(trial_visit: transmart_loader.transmart.TrialVisit) → None

visit_visit(visit: transmart_loader.transmart.Visit) → None